ArcGIS quantile classification

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I have been implementing a workflow previously devised ArcGIS 10.2 in R. The process involves a discretization of an integer raster (the cells are counts) through quantile reclassification.

I've discovered that the ArcGIS quantile classify tool produces completely different results to different R packages and GRASS.

For quantile classification where n=6 produces the following breaks(showing break value start points):ArcGIS:0,1,3,6,11,97

R (classInt package):0,0,0,0,0,0,97 - which effectively yields a 2 class map rather than the desired 6 class map.

My raster data does include a large proportion of a single value (0 in my case) which must be skewing the allocation of equal number of values into quantile bins.

So I guess ArcGIS is doing something more to determine the breaks. Does anyone know what this is and how I may implement it myself?

FYI, the statistics of the raster are:Min = 0Max = 97Mean = 0.601SD = 3.306



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