How to connect GeoServer with Java to a PostGIS/PostGres database?

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I am having trouble using GeoServer to perform a shortest path analysis between two network points. My question is about connecting GeoServer with Java to a PostGIS/PostGres database.

I know that in MapServer we can use PHP functions like PG_CONNECT to connect and PG_QUERY to execute SQL queries... but what are the equivalent commands for GeoServer?



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