3D queriable GIS

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I've used GIS for many years but now I'm moving into 3D GIS, but I have some questions.

Say I have a 3D model of a viliage, I can get this into blender, but I want to be able to run GIS type queries. So I want to have each building linked to a database, select buildings based upon attributes and spatial location (e.g. every building with a certain type of roof, buildings which are greater than 10m apart).

Is this possible and if so what are the best software for the job? I was expecting to use things like Blender, GRASS GIS(possibly in QGIS), and mysql using its GRASS connectivity.

Any advice is welcome, thankyou.

Gary



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